Electronic Chemical Cell

Electronic Chemical Cells

• Overview
  • Multidisciplinary approach in ECCell
  • Overall objectives
• Partners
  • Partner Map for ECCell
  • Ruhr-Universität Bochum - BioMIP
  • Ruhr-Universität Bochum - BioOrg
  • RijksUniversiteit Groningen
  • Syddansk Universitet
  • The Hebrew University of Jerusalem
  • European Center for Living Technology (ECLT)
• Research in ECCell
  • Final Summary Report
    • ECCell Final Executive Summary
  • Deliverables
    • Deliverables List
    • Individual Deliverables
      • ECCell_D1_1 Development of replication chemistry running in the electronic cel
      • ECCell_D1_2 Integration of high information content replication in ECCells
      • ECCell_D2_2 Mid-term report on programmable containment
      • ECCell_D3_4 Autonomous activation of isothermal ligation
      • ECCell_D4_3 ECCell-based integration in microscale chemical processing networks.
      • ECCell_D5_1 UML specification of design space for ECCells.
      • ECCell_D5_3 Completed software system _ User Manual
      • ECCell_D5_3 Completed software system for programming and optimizing ECCells
      • ECCell_D6_1 Demonstration of sequence-specific DNA processing with programmable ECCell gels
      • ECCell_D7_1 Report on ECLT Workshop and Training Activities
      • ECCell_D7_2 Final plan for the use and dissemination of information
  • 2010-11 Progress Report 3
    • ECCell_Yr3_Exec_Summary
  • Midterm Report
    • WP1. Programmable replication
    • WP2: Programmable Containment
    • WP2-3 Contributions by SDU
    • WP3: Electrochemical Activation
    • WP4: ECCell MEMS integration
      • New chemical microprocessor design and interface
      • New single and double layer multilayer electrode arrays
      • New fabrication process of MEMS modules
      • Programmable gelation and molecule transport, mix and split operations
      • Programmable gelation and molecule transport in microscale cycles
      • Programmable Traveling-Wave Electrophoresis (TWE)
    • WP5: ECCell Simulation and Programming
      • DPD simulation of molecular transport in electric fields
      • Modular simulation of electrode array action
        • Simulation of electrode control in experiments
  • 2009-10 Progress Report 2
    • ECCell_Yr2_Exec_Summary
  • 2008-9 Progress Report I
    • ECCell_Yr1_Exec_Summ
  • Review reports
• Publications
  • Publications (Peer-Reviewed)
  • Publications (Other)
• ECCell as ICT
  • ECCell technology and conventional ICT objectives
  • Realtime electronic control
• ECCell Work Program
  • Process Flow
  • WP1. Programmable replication
    • WP1 Background
      • Beyond SPREAD to scpDNA replication
    • WP1 tasks
      • 1. Programmable attachment of DNA to synthetic block copolymer liquid phase supports
      • 2. Programmable self-assembly of building blocks via templated hybridization
      • 3. Programmable chemical DNA ligation via disulphide bonds
      • 4. Programmable DNA copy release
      • 5. Programmable replication of scpDNAs
    • WP1 Milestones and Deliverables
    • WP1 Partner contributions
  • WP2. Programmable containment
    • 1. Programmable scpDNA hydrogels
      • a. Hydrogels from branched scpDNA
      • b. Hydrogels from amphiphilic scpDNA
      • Containment by scpDNA hydrogels
    • 2. Programmable scpDNA vesicles
      • Formation of scpDNA vesicles
      • Reversible control of vesicle formation
      • Containment by scpDNA vesicles
      • Fatty acid reference processes
    • WP2 Milestones and Deliverables
    • WP2 Partner contributions
  • WP3. Electrochemical activation
    • 3.1. Electronic activation of replication
      • Background
      • Milestones and Deliverables
    • 3.2. Electronic activation of containment
      • Background
      • Milestones and deliverables
    • 3.3. Microelectronic control of pH
      • Background
      • Milestones and deliverables
    • WP3 Background References
    • WP3 Milestones and Deliverables
    • WP3 Partner contributions
  • WP4. ECCell MEMS integration
    • Background
      • Chemical microprocessors
        • Chemical microprocessor technology
      • ECCell overall MEMS architectures
        • ECCell hardware module
        • ECCell interconnect architecture A
        • ECCell interconnect architecture B
        • MEMS modules for ECCell
    • WP4 Tasks
      • General description of work
    • WP4 Milestones and Deliverables
    • WP4 Partner contributions
  • WP5. ECCell Simulation and Programming
    • WP5 Background
      • Simulation of multiscale and hybrid systems
      • Molecular Information Processing
      • Programming languages for controlling adaptive and hybrid systems
    • WP5 Tasks
      • 5.1 Development of molecular simulation tools for electronic chemical cell dynamics in microfluidic systems
      • 5.2 Integration of simulation tools describing physical and chemical cell response to electronic signals
      • 5.3 Development and application of an electronic genome architecture attaching specific electrode feedback control programs to each electronic chemical cell.
      • 5.4 Formulation and utilization of a real time UML description of hybrid electronic chemical cell processing
        • UML specification of design space for ECCells
      • 5.5 Development of evolutionary optimization algorithms for ECCells
    • WP5 Milestones and deliverables
    • WP5 Partner contributions
  • WP6. Functionalization and ICT Applications
    • WP6 Background
      • Electronic Chemical Cells will be a basic unit in future molecular ICT
    • WP6 Tasks
      • 6.1 Functionalization of ECCells
      • 6.2 Development of one application of ECCells to molecular information processing
      • 6.3 Survey of ICT applications of ECCells
    • WP6 Milestones and Deliverables
    • WP6 Partner contributions
• Workshops and Conferences
  • Agenda_ECCell_kickoff_Oct08
  • Agenda_ ECCell_workshop_July09
  • Agenda_ECCell 1st review
  • Agenda_ECCell_workshop_Apr10
  • Session at the Alife XII International Conference
  • Agenda_ECCell_workshop_Sep10
  • Agenda_ECCell_2nd_review_rev
  • ECAL, Special session on Chem-Bio ICT with COBRA - Paris
  • FET11 Conference special session on Chem-Bio ICT - Budapest
  • ECCell-MATCHIT joint workshop (Weizmann Inst., Rehovot, Israel, 19-23 Sept 2010)
  • Agenda_ECCell_workshop_Sep11
  • Agenda_ECCell_workshop_ECHS_Nov11
  • Agenda_ECCell Final_Review
  • ECCell Final Review
• Ethics and Social Responsibility
  • ISSP What is living technology? Why should you care? How will ISSP help?
  • Living Technology Working Group, ISSP
• Proposal
• Press
• Sitemap